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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_6DL_77ACE1279.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 197aa MW: 22136.7 Da PI: 7.0171 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.2 | 7.2e-13 | 104 | 163 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r rr+ +NRe+ArrsR RK++++ eL v L + N++L ++l++ ++++ ++ Traes_6DL_77ACE1279.2 104 ERRRRRMVSNRESARRSRMRKQKQLSELWAQVVHLRGANRQLLDQLNRVIRDCDRVLRDN 163 5899*******************************************9999998876665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.8E-13 | 101 | 165 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.2E-9 | 102 | 158 | No hit | No description |
Pfam | PF00170 | 3.6E-10 | 103 | 160 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.358 | 103 | 166 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.84E-11 | 105 | 154 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 108 | 123 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.03E-15 | 110 | 157 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
MYPAELASVP YLSAATATAA FRPHYQVAPD DFLFQYNGGG LLVPQAATSP CSSYQQHDVA 60 GQLLHEAASA GGLLLPFGAR SSNSDESDEY HHHHQAAHCS LAEERRRRRM VSNRESARRS 120 RMRKQKQLSE LWAQVVHLRG ANRQLLDQLN RVIRDCDRVL RDNSSLRAEQ AELRERLEKL 180 PVPVAVAVED AEEEEGR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 125 | RRRRRMVSNRESARRSRMRKQK |
2 | 117 | 124 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU966739 | 2e-46 | EU966739.1 Zea mays clone 296875 G-box-binding factor 1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003570460.1 | 3e-73 | PREDICTED: basic leucine zipper 43-like | ||||
TrEMBL | W5GXB3 | 1e-142 | W5GXB3_WHEAT; Uncharacterized protein | ||||
STRING | BRADI3G56290.1 | 9e-73 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 8e-11 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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